BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028G11SP1|AL428967
(634 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1746 1104 0.0
>3x_Contig1746
Length = 26672
Score = 1104 bits (553), Expect = 0.0
Identities = 616/633 (97%), Gaps = 6/633 (0%)
Strand = Plus / Plus
Query: 3 aagttaggagggaaaacagttagatatggttgctaaagaacaagatcaggatgtgcgcgg 62
|||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 6328 aagttaggagggaaaacagttagatatggttgctaaagaacaag-tcagg-tgtgcgcgg 6385
Query: 63 gattgatagataataaattccgcattctcaagtaaacatctgaatttttccaataaatgc 122
| ||||| |||| | |||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 6386 g-ttgatggatactcaattccgcattctcaagtaaac-tctgaatttttccaataaatgc 6443
Query: 123 aaccattgtggccttgttttctactgtacatagacatctatctggaagtggtaagtgagt 182
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6444 aacc-ttgtggccttgttttctactgtacatagacatctatctggaagtggtaagtgagt 6502
Query: 183 aagtgagtcaggtagggtttgtgttctaaataggaaartagatgtgttaccgttcacctt 242
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 6503 aagtgagtcaggtagggtttgtgttctaaataggaaagtagatgtgttaccgttcacctt 6562
Query: 243 ctgttttattgaattgaattgaaacggcaggcgctggggttgatttggccgataacggaa 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6563 ctgttttattgaattgaattgaaacggcaggcgctggggttgatttggccgataacggaa 6622
Query: 303 tgtgtttttggaactatgtagaccagaagcactcaccttccttatggagacttatttaga 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6623 tgtgtttttggaactatgtagaccagaagcactcaccttccttatggagacttatttaga 6682
Query: 363 tcagacaccaggttrcttagttagtgaatgcttgttaagctgtttgtatataagggtact 422
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6683 tcagacaccaggttgcttagttagtgaatgcttgttaagctgtttgtatataagggtact 6742
Query: 423 atttgakatgatgttgtgtcttgaattgtgtaggtacgctggtwcaagtccaatgtaagt 482
|||||| |||||||||||||||||||||||||||||||||||| |||||||| |||||||
Sbjct: 6743 atttgagatgatgttgtgtcttgaattgtgtaggtacgctggttcaagtccagtgtaagt 6802
Query: 483 agagtactagcgtgggtkgtagcagttgtagtatcagcagcaaacagagaagaacgtttt 542
||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 6803 agagtactagcgtgggtggtagcagttgtagtatcagcagcaagcagagaagaacgtttt 6862
Query: 543 catcaatgagttcatcagaaggaaaggaagctaacgtgttacttatt-gggtccggtggt 601
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 6863 catcaatgagttcatcagaaggaaaggaagctaacgtgttacttattggggtccggtggt 6922
Query: 602 gttggtaccattgtwgcgtacgggattgactat 634
|||||||||||||| ||||||||||||||||||
Sbjct: 6923 gttggtaccattgtagcgtacgggattgactat 6955
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.32
Gapped
Lambda K H
1.38 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4102
Number of Sequences: 1807
Number of extensions: 4102
Number of successful extensions: 110
Number of sequences better than 1.0e-20: 1
length of query: 634
length of database: 10,358,551
effective HSP length: 16
effective length of query: 618
effective length of database: 10,329,639
effective search space: 6383716902
effective search space used: 6383716902
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.3 bits)